Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp6nlQ80XC3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp6nlQ80XC3 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp6nlQ80XC3 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp6nlQ80XC3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp6nlQ80XC3 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.52■□□□□ 0.39
Usp6nlQ80XC3 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Usp6nlQ80XC3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp6nlQ80XC3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Auts2-212ENSMUST00000178555 309 ntBASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp6nlQ80XC3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Usp6nlQ80XC3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms