Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Vrk1Q80X41 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Mir6404-201ENSMUST00000183699 94 ntBASIC15.18■□□□□ 0.02
Vrk1Q80X41 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.18■□□□□ 0.02
Vrk1Q80X41 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Vrk1Q80X41 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.17■□□□□ 0.02
Vrk1Q80X41 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Vrk1Q80X41 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm37166-201ENSMUST00000195473 2474 ntBASIC15.16■□□□□ 0.02
Vrk1Q80X41 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm14494-201ENSMUST00000118786 435 ntBASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm6736-201ENSMUST00000166583 948 ntBASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm27702-201ENSMUST00000184512 56 ntBASIC15.16■□□□□ 0.02
Vrk1Q80X41 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Vrk1Q80X41 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vrk1Q80X41 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Vrk1Q80X41 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms