Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Prpf40bQ80W14 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Gm6550-201ENSMUST00000187574 993 ntBASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Ndufaf2-202ENSMUST00000223734 556 ntBASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Prpf40bQ80W14 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Prpf40bQ80W14 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Prpf40bQ80W14 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Gm13036-201ENSMUST00000117799 748 ntBASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Dancr-204ENSMUST00000132389 2347 ntBASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Prpf40bQ80W14 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Prpf40bQ80W14 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.31■□□□□ 0.52
Prpf40bQ80W14 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Gm10175-201ENSMUST00000086013 645 ntBASIC18.31■□□□□ 0.52
Prpf40bQ80W14 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms