Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim62Q80V85 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.47■□□□□ 0.23
Trim62Q80V85 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.46■□□□□ 0.23
Trim62Q80V85 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC16.46■□□□□ 0.23
Trim62Q80V85 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Trim62Q80V85 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.46■□□□□ 0.23
Trim62Q80V85 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.46■□□□□ 0.23
Trim62Q80V85 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trim62Q80V85 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.46■□□□□ 0.22
Trim62Q80V85 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trim62Q80V85 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.45■□□□□ 0.22
Trim62Q80V85 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.45■□□□□ 0.22
Trim62Q80V85 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Gm7506-201ENSMUST00000207758 815 ntBASIC16.45■□□□□ 0.22
Trim62Q80V85 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.45■□□□□ 0.22
Trim62Q80V85 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.45■□□□□ 0.22
Trim62Q80V85 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.45■□□□□ 0.22
Trim62Q80V85 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Rps4l-201ENSMUST00000071745 943 ntBASIC16.45■□□□□ 0.22
Trim62Q80V85 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim62Q80V85 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trim62Q80V85 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Trim62Q80V85 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trim62Q80V85 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim62Q80V85 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trim62Q80V85 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.44■□□□□ 0.22
Trim62Q80V85 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim62Q80V85 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.43■□□□□ 0.22
Trim62Q80V85 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim62Q80V85 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim62Q80V85 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms