Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Pcdh19Q80TF3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm15173-201ENSMUST00000122049 433 ntBASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Pcdh19Q80TF3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Pcdh19Q80TF3 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm4518-201ENSMUST00000182638 718 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm18206-201ENSMUST00000207027 926 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Pcdh19Q80TF3 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh19Q80TF3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh19Q80TF3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Pcdh19Q80TF3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh19Q80TF3 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms