Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Prpf38bQ80SY5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gm27000-201ENSMUST00000182943 842 ntBASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Prpf38bQ80SY5 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Gm6089-201ENSMUST00000197666 938 ntBASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Prpf38bQ80SY5 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Gm25990-201ENSMUST00000102440 86 ntBASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Prpf38bQ80SY5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms