Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdh8Q7TSK3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdh8Q7TSK3 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdh8Q7TSK3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm4535-201ENSMUST00000182274 558 ntBASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm10355-201ENSMUST00000097146 517 ntBASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Pcdh8Q7TSK3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdh8Q7TSK3 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms