Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm13418-201ENSMUST00000119097 944 ntBASIC16.5■□□□□ 0.23
Cspg5Q71M36 Mir5126-201ENSMUST00000175513 77 ntBASIC16.5■□□□□ 0.23
Cspg5Q71M36 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm43575-201ENSMUST00000196420 516 ntBASIC16.5■□□□□ 0.23
Cspg5Q71M36 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm15590-201ENSMUST00000078419 552 ntBASIC16.5■□□□□ 0.23
Cspg5Q71M36 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cspg5Q71M36 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.49■□□□□ 0.23
Cspg5Q71M36 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm13216-201ENSMUST00000117145 591 ntBASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm14822-201ENSMUST00000122247 291 ntBASIC16.49■□□□□ 0.23
Cspg5Q71M36 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.49■□□□□ 0.23
Cspg5Q71M36 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.49■□□□□ 0.23
Cspg5Q71M36 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cspg5Q71M36 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Gm6736-201ENSMUST00000166583 948 ntBASIC16.48■□□□□ 0.23
Cspg5Q71M36 Gm44430-201ENSMUST00000203376 995 ntBASIC16.48■□□□□ 0.23
Cspg5Q71M36 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cspg5Q71M36 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Gm15467-201ENSMUST00000120582 445 ntBASIC16.47■□□□□ 0.23
Cspg5Q71M36 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.47■□□□□ 0.23
Cspg5Q71M36 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.47■□□□□ 0.23
Cspg5Q71M36 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.47■□□□□ 0.23
Cspg5Q71M36 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cspg5Q71M36 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms