Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Gm11860-201ENSMUST00000122346 1010 ntBASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Casc1Q6TDU8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Gm11336-201ENSMUST00000118168 334 ntBASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Gm33142-201ENSMUST00000193913 867 ntBASIC19.06■□□□□ 0.64
Casc1Q6TDU8 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Casc1Q6TDU8 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Gm18115-201ENSMUST00000221209 621 ntBASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Casc1Q6TDU8 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Gm29518-201ENSMUST00000190858 372 ntBASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Casc1Q6TDU8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Gm17808-201ENSMUST00000200859 894 ntBASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Casc1Q6TDU8 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms