Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Gm18489-201ENSMUST00000172565 551 ntBASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Snrnp40Q6PE01 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 AA543401-201ENSMUST00000164248 1269 ntBASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Snrnp40Q6PE01 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Snrnp40Q6PE01 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Snrnp40Q6PE01 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Snrnp40Q6PE01 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Snrnp40Q6PE01 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Snrnp40Q6PE01 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Snrnp40Q6PE01 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gm5312-201ENSMUST00000203728 547 ntBASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gm5186-201ENSMUST00000218781 920 ntBASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Snrnp40Q6PE01 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms