Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd4Q6PDQ2 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.64■□□□□ 0.89
Chd4Q6PDQ2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC20.64■□□□□ 0.89
Chd4Q6PDQ2 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd4Q6PDQ2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chd4Q6PDQ2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Gm13616-201ENSMUST00000120600 222 ntBASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Mir1895-201ENSMUST00000122615 79 ntBASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC20.63■□□□□ 0.89
Chd4Q6PDQ2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 AC131187.1-201ENSMUST00000224567 809 ntBASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.62■□□□□ 0.89
Chd4Q6PDQ2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Gm20553-201ENSMUST00000204205 844 ntBASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Gm29361-201ENSMUST00000183323 2000 ntBASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Chd4Q6PDQ2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Gm43474-201ENSMUST00000196415 774 ntBASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Gm8396-201ENSMUST00000057361 823 ntBASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.6■□□□□ 0.89
Chd4Q6PDQ2 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Gm11025-201ENSMUST00000140773 466 ntBASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Mir7036b-201ENSMUST00000184791 63 ntBASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd4Q6PDQ2 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd4Q6PDQ2 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms