Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Smarcc2Q6PDG5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Smarcc2Q6PDG5 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Mir6404-201ENSMUST00000183699 94 ntBASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smarcc2Q6PDG5 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smarcc2Q6PDG5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smarcc2Q6PDG5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Smarcc2Q6PDG5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms