Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Kdm3aQ6PCM1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Gm2308-201ENSMUST00000166539 1004 ntBASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.15■□□□□ 0.66
Kdm3aQ6PCM1 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Kdm3aQ6PCM1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kdm3aQ6PCM1 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kdm3aQ6PCM1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Kdm3aQ6PCM1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Kdm3aQ6PCM1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.13■□□□□ 0.65
Kdm3aQ6PCM1 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Kdm3aQ6PCM1 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm13036-201ENSMUST00000117799 748 ntBASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm1401-201ENSMUST00000122048 772 ntBASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm37153-201ENSMUST00000193637 231 ntBASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 Gm18206-201ENSMUST00000207027 926 ntBASIC19.11■□□□□ 0.65
Kdm3aQ6PCM1 AW822252-206ENSMUST00000208904 237 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms