Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm10566-201ENSMUST00000086739 996 ntBASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.66□□□□□ -0.06
Smarcd3Q6P9Z1 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Gm37055-201ENSMUST00000191866 133 ntBASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smarcd3Q6P9Z1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Smarcd3Q6P9Z1 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Gm13436-201ENSMUST00000120418 567 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 App-207ENSMUST00000227737 2827 ntBASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smarcd3Q6P9Z1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smarcd3Q6P9Z1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms