Protein–RNA interactions for Protein: Q6P4S6

Sik3, Serine/threonine-protein kinase SIK3, mousemouse

Predictions only

Length 1,311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sik3Q6P4S6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sik3Q6P4S6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Sik3Q6P4S6 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Gm25911-201ENSMUST00000157621 56 ntBASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sik3Q6P4S6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Gm10175-201ENSMUST00000086013 645 ntBASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sik3Q6P4S6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sik3Q6P4S6 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Sik3Q6P4S6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms