Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six1Q62231 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
Six1Q62231 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Six1Q62231 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Six1Q62231 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.33■□□□□ 0.2
Six1Q62231 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Six1Q62231 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Six1Q62231 Gm6257-201ENSMUST00000163864 910 ntBASIC16.33■□□□□ 0.2
Six1Q62231 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Six1Q62231 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Six1Q62231 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.33■□□□□ 0.2
Six1Q62231 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.33■□□□□ 0.2
Six1Q62231 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.33■□□□□ 0.2
Six1Q62231 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Six1Q62231 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Six1Q62231 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.32■□□□□ 0.2
Six1Q62231 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.32■□□□□ 0.2
Six1Q62231 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six1Q62231 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Six1Q62231 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
Six1Q62231 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Six1Q62231 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Six1Q62231 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Six1Q62231 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Six1Q62231 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Six1Q62231 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Six1Q62231 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six1Q62231 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Six1Q62231 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Six1Q62231 Gm6345-202ENSMUST00000180900 204 ntBASIC16.31■□□□□ 0.2
Six1Q62231 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.31■□□□□ 0.2
Six1Q62231 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.31■□□□□ 0.2
Six1Q62231 Gm9987-201ENSMUST00000069768 567 ntBASIC16.31■□□□□ 0.2
Six1Q62231 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Six1Q62231 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six1Q62231 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Six1Q62231 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.3■□□□□ 0.2
Six1Q62231 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Mir6982-201ENSMUST00000184354 68 ntBASIC16.3■□□□□ 0.2
Six1Q62231 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Six1Q62231 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.3■□□□□ 0.2
Six1Q62231 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.3■□□□□ 0.2
Six1Q62231 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six1Q62231 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six1Q62231 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six1Q62231 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.29■□□□□ 0.2
Six1Q62231 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six1Q62231 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six1Q62231 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six1Q62231 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms