Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Trim27Q62158 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.57■□□□□ 0.72
Trim27Q62158 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim27Q62158 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Trim27Q62158 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Trim27Q62158 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Trim27Q62158 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.56■□□□□ 0.72
Trim27Q62158 Gm15165-201ENSMUST00000118140 502 ntBASIC19.56■□□□□ 0.72
Trim27Q62158 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.56■□□□□ 0.72
Trim27Q62158 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim27Q62158 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim27Q62158 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim27Q62158 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim27Q62158 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim27Q62158 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Ank2-226ENSMUST00000189368 339 ntBASIC19.55■□□□□ 0.72
Trim27Q62158 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim27Q62158 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Trim27Q62158 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 AC163637.1-201ENSMUST00000215491 1894 ntBASIC19.54■□□□□ 0.72
Trim27Q62158 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 Gm8784-201ENSMUST00000222096 1435 ntBASIC19.54■□□□□ 0.72
Trim27Q62158 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Gm15372-201ENSMUST00000120729 834 ntBASIC19.54■□□□□ 0.72
Trim27Q62158 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim27Q62158 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Trim27Q62158 Gm17807-201ENSMUST00000186869 298 ntBASIC19.54■□□□□ 0.72
Trim27Q62158 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.54■□□□□ 0.72
Trim27Q62158 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim27Q62158 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.54■□□□□ 0.72
Trim27Q62158 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC19.53■□□□□ 0.72
Trim27Q62158 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim27Q62158 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim27Q62158 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Trim27Q62158 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim27Q62158 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Trim27Q62158 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim27Q62158 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Gm12895-201ENSMUST00000122214 226 ntBASIC19.52■□□□□ 0.72
Trim27Q62158 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Gm25745-201ENSMUST00000174945 133 ntBASIC19.52■□□□□ 0.72
Trim27Q62158 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.52■□□□□ 0.72
Trim27Q62158 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim27Q62158 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms