Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.86□□□□□ -0.03
VcanQ62059 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.86□□□□□ -0.03
VcanQ62059 Gm11478-201ENSMUST00000117851 599 ntBASIC14.86□□□□□ -0.03
VcanQ62059 Gm11425-201ENSMUST00000119608 498 ntBASIC14.86□□□□□ -0.03
VcanQ62059 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.86□□□□□ -0.03
VcanQ62059 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VcanQ62059 Gm9396-201ENSMUST00000076703 567 ntBASIC14.86□□□□□ -0.03
VcanQ62059 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
VcanQ62059 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
VcanQ62059 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.86□□□□□ -0.03
VcanQ62059 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VcanQ62059 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.86□□□□□ -0.03
VcanQ62059 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VcanQ62059 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.85□□□□□ -0.03
VcanQ62059 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.85□□□□□ -0.03
VcanQ62059 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.85□□□□□ -0.03
VcanQ62059 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.85□□□□□ -0.03
VcanQ62059 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.85□□□□□ -0.03
VcanQ62059 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.85□□□□□ -0.03
VcanQ62059 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
VcanQ62059 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.85□□□□□ -0.03
VcanQ62059 Gm6745-201ENSMUST00000199216 526 ntBASIC14.85□□□□□ -0.03
VcanQ62059 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.85□□□□□ -0.03
VcanQ62059 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
VcanQ62059 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.84□□□□□ -0.03
VcanQ62059 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.84□□□□□ -0.03
VcanQ62059 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VcanQ62059 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.84□□□□□ -0.03
VcanQ62059 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.84□□□□□ -0.03
VcanQ62059 Gm7774-201ENSMUST00000200064 533 ntBASIC14.84□□□□□ -0.03
VcanQ62059 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.84□□□□□ -0.03
VcanQ62059 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
VcanQ62059 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.84□□□□□ -0.03
VcanQ62059 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
VcanQ62059 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Gm17837-201ENSMUST00000186435 985 ntBASIC14.84□□□□□ -0.03
VcanQ62059 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.84□□□□□ -0.03
VcanQ62059 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
VcanQ62059 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
VcanQ62059 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
VcanQ62059 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
VcanQ62059 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.83□□□□□ -0.04
VcanQ62059 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.83□□□□□ -0.04
VcanQ62059 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.83□□□□□ -0.04
VcanQ62059 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.83□□□□□ -0.04
VcanQ62059 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
VcanQ62059 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms