Protein–RNA interactions for Protein: Q61687

Atrx, Transcriptional regulator ATRX, mousemouse

Known RBP Predictions only

Length 2,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtrxQ61687 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AtrxQ61687 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.37□□□□□ -0.11
AtrxQ61687 Gm27622-201ENSMUST00000183779 60 ntBASIC14.37□□□□□ -0.11
AtrxQ61687 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.37□□□□□ -0.11
AtrxQ61687 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.37□□□□□ -0.11
AtrxQ61687 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.37□□□□□ -0.11
AtrxQ61687 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
AtrxQ61687 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AtrxQ61687 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
AtrxQ61687 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.36□□□□□ -0.11
AtrxQ61687 Gm27306-201ENSMUST00000183970 107 ntBASIC14.36□□□□□ -0.11
AtrxQ61687 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.36□□□□□ -0.11
AtrxQ61687 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
AtrxQ61687 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.36□□□□□ -0.11
AtrxQ61687 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC14.36□□□□□ -0.11
AtrxQ61687 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Gm8969-201ENSMUST00000199694 526 ntBASIC14.36□□□□□ -0.11
AtrxQ61687 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
AtrxQ61687 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.36□□□□□ -0.11
AtrxQ61687 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.35□□□□□ -0.11
AtrxQ61687 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.35□□□□□ -0.11
AtrxQ61687 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
AtrxQ61687 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.35□□□□□ -0.11
AtrxQ61687 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.35□□□□□ -0.11
AtrxQ61687 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.35□□□□□ -0.11
AtrxQ61687 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
AtrxQ61687 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
AtrxQ61687 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
AtrxQ61687 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.34□□□□□ -0.11
AtrxQ61687 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
AtrxQ61687 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.34□□□□□ -0.11
AtrxQ61687 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.34□□□□□ -0.11
AtrxQ61687 Gm27301-201ENSMUST00000184012 127 ntBASIC14.34□□□□□ -0.11
AtrxQ61687 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.34□□□□□ -0.11
AtrxQ61687 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.34□□□□□ -0.11
AtrxQ61687 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
AtrxQ61687 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms