Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Gli3Q61602 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
Gli3Q61602 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gli3Q61602 Gm14042-201ENSMUST00000120139 833 ntBASIC21.4■■□□□ 1.02
Gli3Q61602 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gli3Q61602 Gm27533-201ENSMUST00000183800 152 ntBASIC21.4■■□□□ 1.02
Gli3Q61602 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gli3Q61602 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC21.4■■□□□ 1.02
Gli3Q61602 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Gli3Q61602 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Gli3Q61602 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gli3Q61602 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gli3Q61602 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gli3Q61602 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gli3Q61602 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Gli3Q61602 Gm7901-201ENSMUST00000120430 1597 ntBASIC21.39■■□□□ 1.01
Gli3Q61602 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gli3Q61602 Gm18737-201ENSMUST00000173594 937 ntBASIC21.39■■□□□ 1.01
Gli3Q61602 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gli3Q61602 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gli3Q61602 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Gli3Q61602 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Gli3Q61602 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
Gli3Q61602 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Gli3Q61602 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
Gli3Q61602 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Gm29667-201ENSMUST00000190817 490 ntBASIC21.38■■□□□ 1.01
Gli3Q61602 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC21.38■■□□□ 1.01
Gli3Q61602 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Gli3Q61602 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.38■■□□□ 1.01
Gli3Q61602 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 AC154231.1-201ENSMUST00000220564 2175 ntBASIC21.37■■□□□ 1.01
Gli3Q61602 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.37■■□□□ 1.01
Gli3Q61602 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC21.37■■□□□ 1.01
Gli3Q61602 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gli3Q61602 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC21.37■■□□□ 1.01
Gli3Q61602 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Gli3Q61602 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Gli3Q61602 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Gli3Q61602 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC21.36■■□□□ 1.01
Gli3Q61602 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC21.36■■□□□ 1.01
Gli3Q61602 Gm6263-201ENSMUST00000120029 1342 ntBASIC21.36■■□□□ 1.01
Gli3Q61602 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Gli3Q61602 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Gli3Q61602 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC21.36■■□□□ 1.01
Gli3Q61602 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC21.36■■□□□ 1.01
Gli3Q61602 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC21.36■■□□□ 1.01
Gli3Q61602 Gm6257-201ENSMUST00000163864 910 ntBASIC21.36■■□□□ 1.01
Gli3Q61602 Gm9908-201ENSMUST00000211534 448 ntBASIC21.36■■□□□ 1.01
Gli3Q61602 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Asic1-205ENSMUST00000228185 1818 ntBASIC21.35■■□□□ 1.01
Gli3Q61602 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Gli3Q61602 Gm18018-201ENSMUST00000198273 408 ntBASIC21.35■■□□□ 1.01
Gli3Q61602 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Gli3Q61602 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Gli3Q61602 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC21.34■■□□□ 1.01
Gli3Q61602 Gm12091-201ENSMUST00000146791 830 ntBASIC21.34■■□□□ 1.01
Gli3Q61602 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Gli3Q61602 Gm8116-201ENSMUST00000182917 1201 ntBASIC21.34■■□□□ 1.01
Gli3Q61602 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC21.34■■□□□ 1.01
Gli3Q61602 Gm45331-201ENSMUST00000209868 554 ntBASIC21.34■■□□□ 1.01
Gli3Q61602 Gm8131-201ENSMUST00000213783 1570 ntBASIC21.34■■□□□ 1.01
Gli3Q61602 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Gli3Q61602 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC21.33■■□□□ 1.01
Gli3Q61602 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.33■■□□□ 1.01
Gli3Q61602 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC21.33■■□□□ 1.01
Gli3Q61602 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Gli3Q61602 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms