Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Foxc1Q61572 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.72□□□□□ -0.53
Foxc1Q61572 AC125117.2-201ENSMUST00000228344 1140 ntBASIC11.72□□□□□ -0.53
Foxc1Q61572 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.72□□□□□ -0.53
Foxc1Q61572 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.72□□□□□ -0.53
Foxc1Q61572 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Foxc1Q61572 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Foxc1Q61572 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Foxc1Q61572 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC11.71□□□□□ -0.53
Foxc1Q61572 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Foxc1Q61572 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Gm12849-201ENSMUST00000120013 739 ntBASIC11.71□□□□□ -0.53
Foxc1Q61572 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.71□□□□□ -0.53
Foxc1Q61572 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Foxc1Q61572 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Foxc1Q61572 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Foxc1Q61572 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.71□□□□□ -0.54
Foxc1Q61572 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.71□□□□□ -0.54
Foxc1Q61572 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC11.71□□□□□ -0.54
Foxc1Q61572 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Foxc1Q61572 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Foxc1Q61572 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.7□□□□□ -0.54
Foxc1Q61572 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.7□□□□□ -0.54
Foxc1Q61572 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Foxc1Q61572 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms