Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.67■□□□□ 0.42
Ift88Q61371 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ift88Q61371 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.66■□□□□ 0.42
Ift88Q61371 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ift88Q61371 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Ift88Q61371 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.66■□□□□ 0.42
Ift88Q61371 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.65■□□□□ 0.42
Ift88Q61371 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ift88Q61371 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ift88Q61371 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.65■□□□□ 0.42
Ift88Q61371 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ift88Q61371 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Ift88Q61371 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Gm45058-201ENSMUST00000205810 766 ntBASIC17.65■□□□□ 0.42
Ift88Q61371 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
Ift88Q61371 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ift88Q61371 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.65■□□□□ 0.42
Ift88Q61371 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ift88Q61371 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ift88Q61371 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ift88Q61371 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ift88Q61371 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Ift88Q61371 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.64■□□□□ 0.41
Ift88Q61371 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ift88Q61371 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ift88Q61371 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.64■□□□□ 0.41
Ift88Q61371 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ift88Q61371 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Gm7889-201ENSMUST00000185591 958 ntBASIC17.63■□□□□ 0.41
Ift88Q61371 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.63■□□□□ 0.41
Ift88Q61371 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ift88Q61371 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC17.63■□□□□ 0.41
Ift88Q61371 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.63■□□□□ 0.41
Ift88Q61371 Gm18959-201ENSMUST00000208954 655 ntBASIC17.63■□□□□ 0.41
Ift88Q61371 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ift88Q61371 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ift88Q61371 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ift88Q61371 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ift88Q61371 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Ift88Q61371 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms