Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.68□□□□□ -0.22
Clns1aQ61189 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Clns1aQ61189 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Clns1aQ61189 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.68□□□□□ -0.22
Clns1aQ61189 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clns1aQ61189 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.67□□□□□ -0.22
Clns1aQ61189 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC13.67□□□□□ -0.22
Clns1aQ61189 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Clns1aQ61189 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Clns1aQ61189 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.67□□□□□ -0.22
Clns1aQ61189 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Clns1aQ61189 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Actl10-202ENSMUST00000226583 1501 ntBASIC13.66□□□□□ -0.22
Clns1aQ61189 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Gm7638-201ENSMUST00000121348 967 ntBASIC13.66□□□□□ -0.22
Clns1aQ61189 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Clns1aQ61189 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Clns1aQ61189 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Clns1aQ61189 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Clns1aQ61189 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC13.65□□□□□ -0.22
Clns1aQ61189 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.65□□□□□ -0.22
Clns1aQ61189 Il3ra-202ENSMUST00000223589 738 ntBASIC13.65□□□□□ -0.22
Clns1aQ61189 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Clns1aQ61189 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Clns1aQ61189 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Clns1aQ61189 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms