Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Irf9Q61179 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Irf9Q61179 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Irf9Q61179 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Irf9Q61179 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.78■□□□□ 0.76
Irf9Q61179 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC19.78■□□□□ 0.76
Irf9Q61179 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.78■□□□□ 0.76
Irf9Q61179 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Irf9Q61179 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Irf9Q61179 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Irf9Q61179 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Irf9Q61179 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Irf9Q61179 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Irf9Q61179 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.77■□□□□ 0.76
Irf9Q61179 Gm15358-201ENSMUST00000119249 520 ntBASIC19.77■□□□□ 0.76
Irf9Q61179 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.77■□□□□ 0.76
Irf9Q61179 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf9Q61179 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf9Q61179 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Irf9Q61179 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Irf9Q61179 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Irf9Q61179 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Irf9Q61179 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Irf9Q61179 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.76■□□□□ 0.75
Irf9Q61179 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC19.76■□□□□ 0.75
Irf9Q61179 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC19.76■□□□□ 0.75
Irf9Q61179 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC19.76■□□□□ 0.75
Irf9Q61179 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.76■□□□□ 0.75
Irf9Q61179 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Irf9Q61179 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC19.76■□□□□ 0.75
Irf9Q61179 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Irf9Q61179 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Irf9Q61179 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Irf9Q61179 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.75■□□□□ 0.75
Irf9Q61179 Gm11779-201ENSMUST00000118541 368 ntBASIC19.75■□□□□ 0.75
Irf9Q61179 Gm11764-201ENSMUST00000120221 623 ntBASIC19.75■□□□□ 0.75
Irf9Q61179 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.75■□□□□ 0.75
Irf9Q61179 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
Irf9Q61179 AC084391.1-201ENSMUST00000200651 141 ntBASIC19.75■□□□□ 0.75
Irf9Q61179 Gm19164-201ENSMUST00000210667 640 ntBASIC19.75■□□□□ 0.75
Irf9Q61179 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.75■□□□□ 0.75
Irf9Q61179 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Irf9Q61179 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Irf9Q61179 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Gm14140-201ENSMUST00000119999 995 ntBASIC19.74■□□□□ 0.75
Irf9Q61179 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.74■□□□□ 0.75
Irf9Q61179 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.74■□□□□ 0.75
Irf9Q61179 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.74■□□□□ 0.75
Irf9Q61179 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.74■□□□□ 0.75
Irf9Q61179 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.74■□□□□ 0.75
Irf9Q61179 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Irf9Q61179 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Irf9Q61179 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms