Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 AC130829.1-201ENSMUST00000221548 494 ntBASIC22.83■■□□□ 1.25
Ptch1Q61115 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch1Q61115 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
Ptch1Q61115 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ptch1Q61115 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ptch1Q61115 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC22.83■■□□□ 1.24
Ptch1Q61115 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ptch1Q61115 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC22.82■■□□□ 1.24
Ptch1Q61115 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC22.82■■□□□ 1.24
Ptch1Q61115 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC22.82■■□□□ 1.24
Ptch1Q61115 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ptch1Q61115 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC22.82■■□□□ 1.24
Ptch1Q61115 Gm10154-201ENSMUST00000084445 354 ntBASIC22.82■■□□□ 1.24
Ptch1Q61115 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Ptch1Q61115 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch1Q61115 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
Ptch1Q61115 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch1Q61115 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch1Q61115 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch1Q61115 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC22.81■■□□□ 1.24
Ptch1Q61115 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ptch1Q61115 Gm27989-201ENSMUST00000184721 107 ntBASIC22.81■■□□□ 1.24
Ptch1Q61115 Gm17837-201ENSMUST00000186435 985 ntBASIC22.81■■□□□ 1.24
Ptch1Q61115 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC22.81■■□□□ 1.24
Ptch1Q61115 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC22.8■■□□□ 1.24
Ptch1Q61115 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC22.8■■□□□ 1.24
Ptch1Q61115 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
Ptch1Q61115 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.8■■□□□ 1.24
Ptch1Q61115 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ptch1Q61115 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Ptch1Q61115 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Ptch1Q61115 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Ptch1Q61115 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC22.79■■□□□ 1.24
Ptch1Q61115 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC22.79■■□□□ 1.24
Ptch1Q61115 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ptch1Q61115 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gm13453-201ENSMUST00000118708 357 ntBASIC22.78■■□□□ 1.24
Ptch1Q61115 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gm6473-201ENSMUST00000188572 1210 ntBASIC22.78■■□□□ 1.24
Ptch1Q61115 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC22.78■■□□□ 1.24
Ptch1Q61115 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Ptch1Q61115 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Ptch1Q61115 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Ptch1Q61115 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ptch1Q61115 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptch1Q61115 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm29541-201ENSMUST00000191351 678 ntBASIC22.77■■□□□ 1.24
Ptch1Q61115 Gm2272-201ENSMUST00000194903 582 ntBASIC22.77■■□□□ 1.24
Ptch1Q61115 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC22.77■■□□□ 1.24
Ptch1Q61115 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ptch1Q61115 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.77■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms