Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.29■□□□□ 0.04
ClpbQ60649 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.29■□□□□ 0.04
ClpbQ60649 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.29■□□□□ 0.04
ClpbQ60649 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ClpbQ60649 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ClpbQ60649 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.29■□□□□ 0.04
ClpbQ60649 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ClpbQ60649 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ClpbQ60649 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.28■□□□□ 0.04
ClpbQ60649 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.28■□□□□ 0.04
ClpbQ60649 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ClpbQ60649 Gm17971-201ENSMUST00000190239 806 ntBASIC15.28■□□□□ 0.04
ClpbQ60649 Gm44430-201ENSMUST00000203376 995 ntBASIC15.28■□□□□ 0.04
ClpbQ60649 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ClpbQ60649 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
ClpbQ60649 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.28■□□□□ 0.04
ClpbQ60649 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ClpbQ60649 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.27■□□□□ 0.04
ClpbQ60649 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ClpbQ60649 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
ClpbQ60649 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.27■□□□□ 0.04
ClpbQ60649 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ClpbQ60649 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
ClpbQ60649 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ClpbQ60649 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClpbQ60649 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ClpbQ60649 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
ClpbQ60649 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClpbQ60649 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ClpbQ60649 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ClpbQ60649 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
ClpbQ60649 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ClpbQ60649 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.26■□□□□ 0.03
ClpbQ60649 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.26■□□□□ 0.03
ClpbQ60649 Gm36967-201ENSMUST00000193814 266 ntBASIC15.26■□□□□ 0.03
ClpbQ60649 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
ClpbQ60649 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.26■□□□□ 0.03
ClpbQ60649 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms