Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 BC037039-201ENSMUST00000192003 2205 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Trav3-1Q5R1I8 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Ap5m1-205ENSMUST00000227431 3757 ntBASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Gm11687-201ENSMUST00000118911 886 ntBASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav3-1Q5R1I8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav3-1Q5R1I8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Gm43570-201ENSMUST00000199951 3688 ntBASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Etf1-202ENSMUST00000180351 108 ntBASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav3-1Q5R1I8 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.78□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms