Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm8825-201ENSMUST00000182565 998 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm4518-201ENSMUST00000182638 718 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6d-4Q5R1I0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6d-4Q5R1I0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gm13418-201ENSMUST00000119097 944 ntBASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6d-4Q5R1I0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav6d-4Q5R1I0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms