Protein–RNA interactions for Protein: Q5R1A4

Trdv2-2, T cell receptor delta variable 2-2 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-2Q5R1A4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trdv2-2Q5R1A4 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Timm23-208ENSMUST00000226683 750 ntBASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trdv2-2Q5R1A4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Mir1199-201ENSMUST00000117015 119 ntBASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trdv2-2Q5R1A4 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trdv2-2Q5R1A4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trdv2-2Q5R1A4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms