Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc2Q4U2R1 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc2Q4U2R1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc2Q4U2R1 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Herc2Q4U2R1 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.4□□□□□ -0.91
Herc2Q4U2R1 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91
Herc2Q4U2R1 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Gm10154-201ENSMUST00000084445 354 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Gm22902-201ENSMUST00000158488 302 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Mettl6-204ENSMUST00000227595 1027 ntBASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Herc2Q4U2R1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm18222-201ENSMUST00000202416 1387 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm5303-201ENSMUST00000117943 1252 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm15678-201ENSMUST00000117573 960 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm21854-201ENSMUST00000179901 471 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Shd-206ENSMUST00000225145 998 ntBASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Herc2Q4U2R1 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gm18737-201ENSMUST00000173594 937 ntBASIC9.37□□□□□ -0.91
Herc2Q4U2R1 AC159006.1-201ENSMUST00000226396 258 ntBASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Herc2Q4U2R1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms