Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.56■□□□□ 0.56
Prpf38aQ4FK66 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm8344-201ENSMUST00000119813 856 ntBASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Prpf38aQ4FK66 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Prpf38aQ4FK66 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.53■□□□□ 0.56
Prpf38aQ4FK66 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Prpf38aQ4FK66 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Prpf38aQ4FK66 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms