Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim40Q3UWA4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Gm12085-201ENSMUST00000119263 940 ntBASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim40Q3UWA4 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Gm7638-201ENSMUST00000121348 967 ntBASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Il3ra-202ENSMUST00000223589 738 ntBASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim40Q3UWA4 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Gm10698-201ENSMUST00000182663 604 ntBASIC14.96□□□□□ -0.01
Trim40Q3UWA4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.96□□□□□ -0.01
Trim40Q3UWA4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms