Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Znf48Q3US17 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Znf48Q3US17 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm15794-201ENSMUST00000120182 631 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm12895-201ENSMUST00000122214 226 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm10052-201ENSMUST00000168019 960 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm37935-201ENSMUST00000192012 982 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm18206-201ENSMUST00000207027 926 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Gm7729-201ENSMUST00000050143 801 ntBASIC13.18□□□□□ -0.3
Znf48Q3US17 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Znf48Q3US17 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Znf48Q3US17 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Znf48Q3US17 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.17□□□□□ -0.3
Znf48Q3US17 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.17□□□□□ -0.3
Znf48Q3US17 Gm18195-201ENSMUST00000207604 706 ntBASIC13.17□□□□□ -0.3
Znf48Q3US17 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.17□□□□□ -0.3
Znf48Q3US17 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.17□□□□□ -0.3
Znf48Q3US17 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Znf48Q3US17 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Znf48Q3US17 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Znf48Q3US17 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Znf48Q3US17 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Znf48Q3US17 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Znf48Q3US17 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.16□□□□□ -0.3
Znf48Q3US17 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC13.16□□□□□ -0.3
Znf48Q3US17 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Znf48Q3US17 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms