Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Upf3aQ3ULJ3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Upf3aQ3ULJ3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm6257-201ENSMUST00000163864 910 ntBASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm18489-201ENSMUST00000172565 551 ntBASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm9682-201ENSMUST00000197505 556 ntBASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm7787-201ENSMUST00000216858 688 ntBASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.69■□□□□ 0.26
Upf3aQ3ULJ3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Upf3aQ3ULJ3 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms