Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm14767-201ENSMUST00000121559 586 ntBASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Gm12008-201ENSMUST00000117791 755 ntBASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Spg11Q3UHA3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Gm7619-201ENSMUST00000210649 1282 ntBASIC14.61□□□□□ -0.07
Spg11Q3UHA3 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.61□□□□□ -0.07
Spg11Q3UHA3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Spg11Q3UHA3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm22189-201ENSMUST00000103822 86 ntBASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm3786-201ENSMUST00000202659 378 ntBASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm9824-201ENSMUST00000178707 561 ntBASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Spg11Q3UHA3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Spg11Q3UHA3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms