Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ccbe1Q3MI99 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccbe1Q3MI99 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Gm11643-201ENSMUST00000119578 864 ntBASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Gm10252-201ENSMUST00000209541 832 ntBASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccbe1Q3MI99 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm12527-201ENSMUST00000117967 564 ntBASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm22240-201ENSMUST00000175225 82 ntBASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccbe1Q3MI99 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Gm43859-201ENSMUST00000200075 1412 ntBASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ccbe1Q3MI99 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms