Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.69■□□□□ 0.1
Q3KNL4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.69■□□□□ 0.1
Q3KNL4 Gm27389-201ENSMUST00000183622 195 ntBASIC15.69■□□□□ 0.1
Q3KNL4 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Q3KNL4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q3KNL4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.68■□□□□ 0.1
Q3KNL4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Q3KNL4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Q3KNL4 Gm43799-201ENSMUST00000201845 579 ntBASIC15.68■□□□□ 0.1
Q3KNL4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.68■□□□□ 0.1
Q3KNL4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.68■□□□□ 0.1
Q3KNL4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.68■□□□□ 0.1
Q3KNL4 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Q3KNL4 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q3KNL4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Q3KNL4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.67■□□□□ 0.1
Q3KNL4 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.67■□□□□ 0.1
Q3KNL4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.67■□□□□ 0.1
Q3KNL4 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.67■□□□□ 0.1
Q3KNL4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Q3KNL4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.67■□□□□ 0.1
Q3KNL4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.66■□□□□ 0.1
Q3KNL4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.66■□□□□ 0.1
Q3KNL4 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.66■□□□□ 0.1
Q3KNL4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Q3KNL4 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.66■□□□□ 0.1
Q3KNL4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Q3KNL4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Q3KNL4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Q3KNL4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.65■□□□□ 0.1
Q3KNL4 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Q3KNL4 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Q3KNL4 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms