Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Smn1P97801 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smn1P97801 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smn1P97801 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.69□□□□□ -0.22
Smn1P97801 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC13.69□□□□□ -0.22
Smn1P97801 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.69□□□□□ -0.22
Smn1P97801 Gm10653-202ENSMUST00000139570 835 ntBASIC13.69□□□□□ -0.22
Smn1P97801 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC13.69□□□□□ -0.22
Smn1P97801 Gm18421-201ENSMUST00000204122 625 ntBASIC13.69□□□□□ -0.22
Smn1P97801 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Arhgef4-208ENSMUST00000211073 171 ntBASIC13.69□□□□□ -0.22
Smn1P97801 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Smn1P97801 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smn1P97801 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Smn1P97801 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Smn1P97801 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.68□□□□□ -0.22
Smn1P97801 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC13.68□□□□□ -0.22
Smn1P97801 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Smn1P97801 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.68□□□□□ -0.22
Smn1P97801 Gm11539-201ENSMUST00000119837 557 ntBASIC13.68□□□□□ -0.22
Smn1P97801 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.68□□□□□ -0.22
Smn1P97801 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.68□□□□□ -0.22
Smn1P97801 Slc35b2-207ENSMUST00000226086 850 ntBASIC13.68□□□□□ -0.22
Smn1P97801 Odf3b-204ENSMUST00000227834 930 ntBASIC13.68□□□□□ -0.22
Smn1P97801 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.68□□□□□ -0.22
Smn1P97801 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Smn1P97801 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.67□□□□□ -0.22
Smn1P97801 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.67□□□□□ -0.22
Smn1P97801 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.67□□□□□ -0.22
Smn1P97801 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Smn1P97801 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.67□□□□□ -0.22
Smn1P97801 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Smn1P97801 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Smn1P97801 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms