Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.42□□□□□ -0.26
Npas1P97459 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.42□□□□□ -0.26
Npas1P97459 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Npas1P97459 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Npas1P97459 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Npas1P97459 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.41□□□□□ -0.26
Npas1P97459 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Npas1P97459 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Npas1P97459 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Npas1P97459 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.4□□□□□ -0.26
Npas1P97459 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Npas1P97459 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Npas1P97459 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Npas1P97459 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Npas1P97459 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Npas1P97459 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.39□□□□□ -0.27
Npas1P97459 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Npas1P97459 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Npas1P97459 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Npas1P97459 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.39□□□□□ -0.27
Npas1P97459 Gm37025-201ENSMUST00000195159 829 ntBASIC13.39□□□□□ -0.27
Npas1P97459 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Gm10602-201ENSMUST00000098239 609 ntBASIC13.39□□□□□ -0.27
Npas1P97459 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Npas1P97459 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.39□□□□□ -0.27
Npas1P97459 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Npas1P97459 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Npas1P97459 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms