Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1aP97445 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.65□□□□□ -0.06
Cacna1aP97445 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.65□□□□□ -0.06
Cacna1aP97445 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.65□□□□□ -0.06
Cacna1aP97445 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1aP97445 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1aP97445 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.07
Cacna1aP97445 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.65□□□□□ -0.07
Cacna1aP97445 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1aP97445 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1aP97445 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1aP97445 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1aP97445 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.64□□□□□ -0.07
Cacna1aP97445 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.64□□□□□ -0.07
Cacna1aP97445 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Gm44335-201ENSMUST00000196879 141 ntBASIC14.64□□□□□ -0.07
Cacna1aP97445 Gm44297-201ENSMUST00000198304 141 ntBASIC14.64□□□□□ -0.07
Cacna1aP97445 Gm44346-201ENSMUST00000198851 141 ntBASIC14.64□□□□□ -0.07
Cacna1aP97445 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cacna1aP97445 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.64□□□□□ -0.07
Cacna1aP97445 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1aP97445 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1aP97445 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.63□□□□□ -0.07
Cacna1aP97445 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.63□□□□□ -0.07
Cacna1aP97445 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1aP97445 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1aP97445 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms