Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.32■□□□□ 0.36
Trim43cP86449 Gm12895-201ENSMUST00000122214 226 ntBASIC17.32■□□□□ 0.36
Trim43cP86449 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Trim43cP86449 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim43cP86449 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim43cP86449 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Gm17807-201ENSMUST00000186869 298 ntBASIC17.32■□□□□ 0.36
Trim43cP86449 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.32■□□□□ 0.36
Trim43cP86449 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim43cP86449 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim43cP86449 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Trim43cP86449 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Gm27867-201ENSMUST00000184778 125 ntBASIC17.31■□□□□ 0.36
Trim43cP86449 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.31■□□□□ 0.36
Trim43cP86449 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim43cP86449 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trim43cP86449 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Gm15165-201ENSMUST00000118140 502 ntBASIC17.3■□□□□ 0.36
Trim43cP86449 Gm28033-201ENSMUST00000184224 96 ntBASIC17.3■□□□□ 0.36
Trim43cP86449 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim43cP86449 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim43cP86449 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.3■□□□□ 0.36
Trim43cP86449 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.29■□□□□ 0.36
Trim43cP86449 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Gm14859-201ENSMUST00000117752 357 ntBASIC17.29■□□□□ 0.36
Trim43cP86449 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Gm6257-201ENSMUST00000163864 910 ntBASIC17.29■□□□□ 0.36
Trim43cP86449 Gm21362-201ENSMUST00000194272 928 ntBASIC17.29■□□□□ 0.36
Trim43cP86449 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim43cP86449 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.29■□□□□ 0.36
Trim43cP86449 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Gm44616-201ENSMUST00000206417 1732 ntBASIC17.29■□□□□ 0.36
Trim43cP86449 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim43cP86449 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Trim43cP86449 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim43cP86449 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Gm16011-201ENSMUST00000121567 2662 ntBASIC17.28■□□□□ 0.36
Trim43cP86449 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trim43cP86449 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim43cP86449 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.28■□□□□ 0.36
Trim43cP86449 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim43cP86449 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trim43cP86449 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim43cP86449 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim43cP86449 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms