Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hist1h3bP84228 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Hist1h3bP84228 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Gm29518-201ENSMUST00000190858 372 ntBASIC14.03□□□□□ -0.16
Hist1h3bP84228 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hist1h3bP84228 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hist1h3bP84228 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Gm45328-201ENSMUST00000210942 917 ntBASIC14.02□□□□□ -0.17
Hist1h3bP84228 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hist1h3bP84228 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.01□□□□□ -0.17
Hist1h3bP84228 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.01□□□□□ -0.17
Hist1h3bP84228 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Gm17808-201ENSMUST00000200859 894 ntBASIC14.01□□□□□ -0.17
Hist1h3bP84228 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hist1h3bP84228 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Ptprs-211ENSMUST00000223859 5588 ntBASIC14□□□□□ -0.17
Hist1h3bP84228 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14□□□□□ -0.17
Hist1h3bP84228 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Hist1h3bP84228 AA414768-201ENSMUST00000121924 1257 ntBASIC14□□□□□ -0.17
Hist1h3bP84228 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms