Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.72□□□□□ -0.21
Ufd1P70362 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
Ufd1P70362 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Ufd1P70362 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.71□□□□□ -0.21
Ufd1P70362 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Gm42545-201ENSMUST00000202755 922 ntBASIC13.71□□□□□ -0.21
Ufd1P70362 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Ufd1P70362 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Ufd1P70362 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.71□□□□□ -0.21
Ufd1P70362 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Ufd1P70362 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Ufd1P70362 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ufd1P70362 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC13.71□□□□□ -0.22
Ufd1P70362 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.71□□□□□ -0.22
Ufd1P70362 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ufd1P70362 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Ufd1P70362 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.22
Ufd1P70362 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.7□□□□□ -0.22
Ufd1P70362 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.7□□□□□ -0.22
Ufd1P70362 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Gm13148-201ENSMUST00000118892 745 ntBASIC13.7□□□□□ -0.22
Ufd1P70362 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC13.7□□□□□ -0.22
Ufd1P70362 Gm44672-201ENSMUST00000206944 1098 ntBASIC13.7□□□□□ -0.22
Ufd1P70362 AC163280.1-201ENSMUST00000228194 1100 ntBASIC13.7□□□□□ -0.22
Ufd1P70362 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Ufd1P70362 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ufd1P70362 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Ufd1P70362 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ufd1P70362 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms