Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrkcbP68404 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PrkcbP68404 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.2■□□□□ 0.34
PrkcbP68404 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.19■□□□□ 0.34
PrkcbP68404 Gm18733-201ENSMUST00000173950 856 ntBASIC17.19■□□□□ 0.34
PrkcbP68404 Mir5131-201ENSMUST00000175426 93 ntBASIC17.19■□□□□ 0.34
PrkcbP68404 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.19■□□□□ 0.34
PrkcbP68404 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PrkcbP68404 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PrkcbP68404 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PrkcbP68404 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PrkcbP68404 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Gm15173-201ENSMUST00000122049 433 ntBASIC17.18■□□□□ 0.34
PrkcbP68404 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.18■□□□□ 0.34
PrkcbP68404 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Gm2651-201ENSMUST00000203560 838 ntBASIC17.18■□□□□ 0.34
PrkcbP68404 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.18■□□□□ 0.34
PrkcbP68404 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PrkcbP68404 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PrkcbP68404 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm7230-201ENSMUST00000173026 815 ntBASIC17.17■□□□□ 0.34
PrkcbP68404 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.17■□□□□ 0.34
PrkcbP68404 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm6089-201ENSMUST00000197666 938 ntBASIC17.17■□□□□ 0.34
PrkcbP68404 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.17■□□□□ 0.34
PrkcbP68404 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
PrkcbP68404 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
PrkcbP68404 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC17.17■□□□□ 0.34
PrkcbP68404 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PrkcbP68404 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.16■□□□□ 0.34
PrkcbP68404 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
PrkcbP68404 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC17.16■□□□□ 0.34
PrkcbP68404 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Gm26917-202ENSMUST00000192833 3329 ntBASIC17.16■□□□□ 0.34
PrkcbP68404 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PrkcbP68404 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PrkcbP68404 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms