Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmgb1P63158 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hmgb1P63158 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Hmgb1P63158 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Gm9013-201ENSMUST00000132939 882 ntBASIC17.53■□□□□ 0.4
Hmgb1P63158 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Hmgb1P63158 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmgb1P63158 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Hmgb1P63158 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.52■□□□□ 0.4
Hmgb1P63158 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmgb1P63158 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hmgb1P63158 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hmgb1P63158 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hmgb1P63158 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmgb1P63158 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC17.52■□□□□ 0.39
Hmgb1P63158 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hmgb1P63158 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb1P63158 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb1P63158 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hmgb1P63158 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb1P63158 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Hmgb1P63158 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Hmgb1P63158 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Mir770-201ENSMUST00000103252 94 ntBASIC17.51■□□□□ 0.39
Hmgb1P63158 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.51■□□□□ 0.39
Hmgb1P63158 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Hmgb1P63158 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmgb1P63158 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hmgb1P63158 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.5■□□□□ 0.39
Hmgb1P63158 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.5■□□□□ 0.39
Hmgb1P63158 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hmgb1P63158 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmgb1P63158 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hmgb1P63158 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms