Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Ybx1P62960 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.29■□□□□ 0.2
Ybx1P62960 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Ybx1P62960 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.29■□□□□ 0.2
Ybx1P62960 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.29■□□□□ 0.2
Ybx1P62960 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.29■□□□□ 0.2
Ybx1P62960 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.29■□□□□ 0.2
Ybx1P62960 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.29■□□□□ 0.2
Ybx1P62960 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ybx1P62960 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.29■□□□□ 0.2
Ybx1P62960 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ybx1P62960 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.28■□□□□ 0.2
Ybx1P62960 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.28■□□□□ 0.2
Ybx1P62960 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.28■□□□□ 0.2
Ybx1P62960 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.28■□□□□ 0.2
Ybx1P62960 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.28■□□□□ 0.2
Ybx1P62960 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ybx1P62960 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.28■□□□□ 0.2
Ybx1P62960 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Ybx1P62960 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
Ybx1P62960 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ybx1P62960 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Ybx1P62960 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.27■□□□□ 0.2
Ybx1P62960 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.27■□□□□ 0.2
Ybx1P62960 Mir3113-201ENSMUST00000175478 76 ntBASIC16.27■□□□□ 0.2
Ybx1P62960 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.27■□□□□ 0.2
Ybx1P62960 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ybx1P62960 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.27■□□□□ 0.2
Ybx1P62960 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ybx1P62960 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ybx1P62960 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ybx1P62960 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.27■□□□□ 0.19
Ybx1P62960 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Ybx1P62960 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ybx1P62960 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ybx1P62960 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Ybx1P62960 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC16.26■□□□□ 0.19
Ybx1P62960 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.26■□□□□ 0.19
Ybx1P62960 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Ybx1P62960 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.26■□□□□ 0.19
Ybx1P62960 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ybx1P62960 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms