Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Lsm6P62313 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.98□□□□□ -0.17
Lsm6P62313 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.98□□□□□ -0.17
Lsm6P62313 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.98□□□□□ -0.17
Lsm6P62313 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Lsm6P62313 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.98□□□□□ -0.17
Lsm6P62313 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Lsm6P62313 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.98□□□□□ -0.17
Lsm6P62313 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Lsm6P62313 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lsm6P62313 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm6P62313 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm6P62313 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm6P62313 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lsm6P62313 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.97□□□□□ -0.17
Lsm6P62313 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lsm6P62313 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lsm6P62313 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Lsm6P62313 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC13.96□□□□□ -0.17
Lsm6P62313 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.96□□□□□ -0.17
Lsm6P62313 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lsm6P62313 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Lsm6P62313 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lsm6P62313 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm6P62313 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm6P62313 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Lsm6P62313 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm6P62313 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm6P62313 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.95□□□□□ -0.18
Lsm6P62313 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC13.95□□□□□ -0.18
Lsm6P62313 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.95□□□□□ -0.18
Lsm6P62313 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Lsm6P62313 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.95□□□□□ -0.18
Lsm6P62313 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Lsm6P62313 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lsm6P62313 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms