Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Atxn1P54254 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.79■□□□□ 0.12
Atxn1P54254 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.79■□□□□ 0.12
Atxn1P54254 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.79■□□□□ 0.12
Atxn1P54254 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.79■□□□□ 0.12
Atxn1P54254 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.79■□□□□ 0.12
Atxn1P54254 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.79■□□□□ 0.12
Atxn1P54254 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.79■□□□□ 0.12
Atxn1P54254 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.79■□□□□ 0.12
Atxn1P54254 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Atxn1P54254 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Atxn1P54254 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.78■□□□□ 0.12
Atxn1P54254 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Atxn1P54254 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.78■□□□□ 0.12
Atxn1P54254 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Atxn1P54254 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Atxn1P54254 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Atxn1P54254 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Atxn1P54254 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
Atxn1P54254 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Gm7222-201ENSMUST00000117512 906 ntBASIC15.77■□□□□ 0.12
Atxn1P54254 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Atxn1P54254 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Atxn1P54254 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Atxn1P54254 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atxn1P54254 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atxn1P54254 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atxn1P54254 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atxn1P54254 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Atxn1P54254 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.77■□□□□ 0.11
Atxn1P54254 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Atxn1P54254 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Atxn1P54254 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.76■□□□□ 0.11
Atxn1P54254 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.76■□□□□ 0.11
Atxn1P54254 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.76■□□□□ 0.11
Atxn1P54254 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Atxn1P54254 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC15.76■□□□□ 0.11
Atxn1P54254 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.76■□□□□ 0.11
Atxn1P54254 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.76■□□□□ 0.11
Atxn1P54254 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.76■□□□□ 0.11
Atxn1P54254 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC15.76■□□□□ 0.11
Atxn1P54254 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Atxn1P54254 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Atxn1P54254 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Atxn1P54254 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms