Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Nkx2-1P50220 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.24□□□□□ -0.29
Nkx2-1P50220 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Spcs1-207ENSMUST00000228767 1008 ntBASIC13.24□□□□□ -0.29
Nkx2-1P50220 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Nkx2-1P50220 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nkx2-1P50220 AC154649.1-201ENSMUST00000227392 384 ntBASIC13.23□□□□□ -0.29
Nkx2-1P50220 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-1P50220 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.22□□□□□ -0.29
Nkx2-1P50220 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.22□□□□□ -0.29
Nkx2-1P50220 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-1P50220 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-1P50220 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Nkx2-1P50220 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms