Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Xcl1P47993 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC10.42□□□□□ -0.74
Xcl1P47993 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC10.42□□□□□ -0.74
Xcl1P47993 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC10.42□□□□□ -0.74
Xcl1P47993 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Xcl1P47993 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Xcl1P47993 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC10.41□□□□□ -0.74
Xcl1P47993 Gm43060-201ENSMUST00000200621 289 ntBASIC10.41□□□□□ -0.74
Xcl1P47993 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Xcl1P47993 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Tfap2a-203ENSMUST00000223869 2037 ntBASIC10.41□□□□□ -0.74
Xcl1P47993 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Xcl1P47993 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Xcl1P47993 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Xcl1P47993 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC10.4□□□□□ -0.74
Xcl1P47993 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Xcl1P47993 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms